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Neko: A Modern, Portable, and Scalable Framework for High-Fidelity Computational Fluid Dynamics

Recent trends and advancements including more diverse and heterogeneous hardware in High-Performance Computing are challenging scientific software developers in their pursuit of good performance and efficient numerical methods. As a result, the well-known maxim “software outlives hardware” may no longer necessarily hold true, and researchers are today forced to re-factor their codes to leverage these powerful new heterogeneous systems. We present Neko – a portable framework for high-fidelity spectral element flow simulations. Unlike prior works, Neko adopts a modern object-oriented Fortran 2008 approach, allowing multi-tier abstractions of the solver stack and facilitating various hardware backends ranging from general-purpose processors, accelerators down to exotic vector processors and Field-Programmable Gate Arrays (FPGAs) via Neko’s device abstraction layer. Focusing on the performance and accuracy of Neko, we show the first direct numerical simulation (DNS) of a Flettner rotor submerged in a turbulent boundary layer, observing excellent agreement of lift with experimental data. Using a mesh with five million spectral elements, which turns into more than a billion unique degrees of freedom, the simulation requires less than three days to complete on accelerated systems compared to weeks on traditional non-accelerated systems. Finally, we present performance measurements on a wide range of accelerated computing platforms, including the EuroHPC pre-exascale system LUMI, where Neko achieves excellent parallel efficiency for a large DNS of turbulent fluid flow using up to 80% of the entire LUMI supercomputer.

MS4F – Cross-Cutting Aspects of Exploiting Exascale Platforms for High-Fidelity CFD in Turbulence Research

This minisymposium was chaired by a CEEC consortium member and contained the presentation of another CEEC consortium member. The arrival of exascale computing has opened up unprecedented simulation capabilities for Computational Fluid Dynamics (CFD) applications. While offering high theoretical peak performance and high memory bandwidth, efficiently exploiting these systems necessitates complex programming models and significant programming investments .

Sustainable and Reliable Computing with Tools: Analyzing Precision Appetites of CFD Applications with VerifiCarlo

Energy consumption constraints for large-scale computing encourage scientists to revise the architecture design of hardware but also applications, algorithms, as well as the underlying working/ storage precision. I will introduce an approach to address the issue of sustainable, but still reliable, computations from the perspective of computer arithmetic tools. We employ VerifiCarlo and its variable precision backend to identify the parts of the code that benefit from smaller floating-point formats. Finally, we show preliminary results on proxies of CFD applications.

VPREC to analyze the precision appetites and numerical abnormalities of several proxy applications

The third in a series of presentations from Roman Iakymchuk on work using tools to investigate mixed precision possibilities. He and his co-author Pablo de Oliveira Castro introduce an approach to address the issue of sustainable computations with computer arithmetic tools. They use the variable precision backend (VPREC) to identify parts of code that can benefit from smaller floating-point formats and show preliminary results on several proxy applications.

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1st CEEC Community Workshop: Energy-Efficient, Fault Resilient, and Scalable Solvers for CFD Codes

Join us for our first annual community workshop! The energy consumption constraint for large-scale computing encourages scientists to revise the architecture design of hardware but also applications, algorithms, as well as the underlying working/ storage precision. The main aim is to make the computations energy-efficient (aka sustainable) and robust numerically but also in terms of fault tolerance. On the level of algorithmic solutions, we propose to utilize all provided resources wisely by exhibiting algorithms to computation overlapping but even more communication overlapping strategies. We also promote mixed-precision strategies with the aid of computer arithmetic tools like VerifiCarlo and its variable precision backend. Hence, before lowering precision, one must ensure that the simulation is numerically correct, e.g. by relying on alternative floating-point models/ rounding to pinpoint numerical bugs and to estimate the accuracy. We also work on fault tolerant and resilient algorithms, adaptivity and meshing/ mesh refinement that adapt to the heterogeneous nature of current machines. Another issue discussed in the workshop is the adaptation of adjoint-based topology optimization methods to spectral-element CFD codes. Therefore, in this workshop, we will share our approaches, lessons learnt with preliminary results, and outline perspectives for the upcoming three years of the project.

Code of the Month vol.6 “Neko by CEEC” — PUBLIC event

Online

Recent trends and advancements including more diverse and heterogeneous hardware in High-Performance Computing are challenging scientific software developers in their pursuit of good performance and efficient numerical methods. As a result, the well-known maxim “software outlives hardware” may no longer necessarily hold true, and researchers are today forced to re-factor their codes to leverage these powerful new heterogeneous systems. We present Neko – a portable framework for high-fidelity spectral element flow simulations. Unlike prior works, Neko adopts a modern object-oriented Fortran 2008 approach, allowing multi-tier abstractions of the solver stack and facilitating various hard- ware backends ranging from general-purpose processors, accelerators down to exotic vector processors and Field Programmable Gate Arrays (FPGAs) via Neko’s device abstraction layer. Focusing on Neko’s performance and exascale readiness, we outline the optimisation and algorithmic work necessary to ensure scalability and performance portability across a wide range of platforms. Finally, we present performance measurements on a wide range of accelerated computing platforms, including the EuroHPC pre-exascale systems LUMI and Leonardo, where Neko achieves excellent parallel efficiency for an extreme-scale direct numerical simulation (DNS) of turbulent thermal convection using up to 80% of the entire LUMI supercomputer.

CEEC at the Euro HPC Summit Poster Session

Flanders Meeting and Convention Centre, A Room with a ZOO Koningin Astridplein 20-26, Antwerp, Belgium

If you’re interested in our progress over the last year or hoping to ask us questions about our plans for the future, don’t miss the chance to talk with our own Niclas Jansson at the first poster session of the Euro HPC Summit on Tuesday, March 19th!